Can I pay the bills for my nonprofit out of the nonprofit bank account without it affecting my bankruptcy filing?

Assuming the Non Profit is NOT your asset, you are free to pay business expenses.

IF the nonprofit is a separate legal entity (e.g. an LLC or a corporation) then it is a separate entity, and it can pay its bills without raising a problem for your personal bankruptcy. In a situation like yours, however, you would benefit from retaining an experienced bankruptcy lawyer. Good Luck.

Is the nonprofit a corporation or other separate entity? If it is, then the financial transactions of the nonprofit have nothing to do with your bankruptcy.

My wink, wink nonprofit? If you're filing bankruptcy sound like your business was an actual unprofitable nonprofit, if your business model failed despite all the tax exemptions, you better find a new nonprofit to exploit. You can't own a nonprofit, in theory they are owned by society and run for the benefit of the community - that's a laugh. Since the nonprofit is a separate entity which you don't own, the business bills can be paid out of the business account. However, if, like many nonprofit "owners", you have been plundering the business funds to pay your personal bills, this can come out in a bankruptcy and you might have tax and criminal problems.

As long as the finances are properly segregated and documented, you should be able to carry on the nonprofit affairs without affecting your personal bankruptcy. You may have to disclose what those expenses were, but as long as they are legitimate, there will be no problem.